Overview
Bonds Basic Reactions
Functional Groups
Stereochemistry
Thermodynamics
pH and Buffers
Amino Acids
Enzymes Quizzes
Pre Knowledge
Functional Groups

Listed below are a number of functional groups in a variety of biochemical molecules. Many of the functional groups will be either the reactants or products in biochemical reactions. As you examine the structures in the table below, remember:
 *  An R- group attached to a C, S or N is called a side chain, or group.
 *  When the side chain is attached to a C=O as in R-C=O, such a group is called an ACYL group.
 *  When R is attached to a C, it is called an ALKYL group.
After you look at the table, scroll down for more details about the functional groups.



Details of Functional Groups

Group
Written as...
Additional Information
Alcohols

R-CH2-OH (primary)
R2-CH-OH (secondary)
R3-C-OH (tertiary)

Sustitution of additional groups on the carbon atom defines whether the alcohol is primary, secondary or tertiary. The carbon atom in these cases is in sp3 hybrid state.
Aldehydes, and

Ketones

R-CHO

R2-C=O

The c arbon atom is double-bonded to oxygen in both cases. The difference is in substitutions. An aldehyde has an R group and a H atom. A ketone has both substituents as R groups. The carbon atom in these cases is in sp2 hybrid state.
Acids R-C=O
!
OH
Acids are able to dissociate into H+ and anions.
Acid Anhydrides (R-CO)2O Acid anhydrides are formed from molecules of similar or different acids with the elimination of a molecule of water. An example would the formation of pyrophosphate from two molecules of phosphoric acid.
Esters RCH2-O-COCH3 An ester is formed from an alcohol and an acid with the elimination of a molecule of water. Physiological examples include formation of triacyl glycerols from fatty acids and glycerol.

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